rs7035313 chr9:122264840 A>C
- Sequence
tgccaggccgcccgtgacgcgtta[A/C]gcctgcgccgcctcctggcttcgt
- ASB in cell types
- 22RV1 (prostate carcinoma) HepG2 (hepatoblastoma) EA.hy 926 (human umbilical vein endothelial cell line) renal cortex
- ASB for transcription factors
- ANDR_HUMAN TYY1_HUMAN HIF1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | n/a | 4.00 | 2.00 | n/a | No Hit | |||
| TYY1_HUMAN | 2.73 | -4.61 | 1.50 | n/a | No Hit | |||
| HIF1A_HUMAN | 2.11 | -0.86 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, autism, hdl cholesterol, height, infant head circumference, ldl cholesterol, triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Amygdala, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid, Whole_Blood