rs703657 chr12:103957073 T>A
- Sequence
tttccccgcgccccttctacctct[T/A]ggaggagaggaactgtggacttca
- ASB in cell types
- MDA-MB-231 (breast adenocarcinoma) adult erythroblasts breast tumor
- ASB for transcription factors
- HCFC1_HUMAN JUN_HUMAN ESR1_HUMAN RBBP5_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HCFC1_HUMAN | 2.57 | n/a | 2.00 | n/a | n/a | |||
| JUN_HUMAN | 0.10 | 1.07 | 1.11 | n/a | No Hit | |||
| ESR1_HUMAN | 2.69 | -5.34 | 2.00 | n/a | No Hit | |||
| RBBP5_HUMAN | 1.49 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid