rs704034 chr5:40842014 A>G

Sequence
atccagggtttgtttttcaagtag[A/G]tgaattcgtggatatttacagtgc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 0.06 2.21 1.000.04 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP nicotine dependence (smoking)
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg

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