rs704417 chr3:64266748 C>T

Sequence
tagctgcacagataaaaacatttg[C/T]gtacagaaagcagggaactcaaag
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
TCF21_HUMAN ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 2.13 -2.77 1.3·10-31.00 6.00 n/a No Hit
ESR1_HUMAN 0.30 1.48 0.766.6·10-3 5.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI seborrheic dermatitis
GTEx eQTL Liver

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