rs704874 chr1:32651022 T>G

Sequence
gtcaacgccggcgcgcgcaatcgc[T/G]ggaagtcggctcggggaggcgtgg
ASB in cell types
CD14+ monocytes foreskin keratinocyte
ASB for transcription factors
STAT1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN n/a 2.71 1.001.2·10-3 4.00 n/a No Hit
CTCF_HUMAN 0.52 1.13 1.003.5·10-3 1.18 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  comorbid depressive syndrome and alcohol dependence,  hdl cholesterol,  hypertension (early onset hypertension),  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Breast_Mammary_Tissue,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Thyroid,  Whole_Blood

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