rs705197 chr1:34379235 G>A
- Sequence
gggcacataatcaggcactccaga[G/A]aagaaaaatggccacgattaccag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MTG16_HUMAN ARI1B_HUMAN ATF3_HUMAN REQU_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG16_HUMAN | -1.09 | 1.09 | 1.00 | n/a | n/a | |||
| ARI1B_HUMAN | -1.31 | 1.31 | 1.00 | n/a | n/a | |||
| ATF3_HUMAN | -1.69 | 1.20 | 1.17 | n/a | No Hit | |||
| REQU_HUMAN | -1.41 | 1.94 | 1.00 | n/a | n/a | |||
| NCOR1_HUMAN | -0.19 | 1.78 | 1.00 | n/a | n/a |
Items per page:
1 – 5 of 8
Motif analysis
No data available
Genetic associations
GRASP abnormal involuntary movement scale, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, college completion, fasting insulin, homa-b, homa-ir, severe diabetic retinopathy