rs705705 chr12:56041720 G>C
- Sequence
cacttggggcaggggggaaggggg[G/C]gaggggggagcctcttggcttcgc
- ASB in cell types
- GM19099 (female B-cells Lymphoblastoid Cell Lines) HCT-116 (colon carcinoma) GM12892 (female B-cells lymphoblastoid cell line) PANC1 (pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.41 | 1.10 | 1.47 | n/a | No Hit | |||
| RAD21_HUMAN | 3.40 | 2.22 | 1.42 | n/a | n/a | |||
| STAG1_HUMAN | 2.53 | -2.56 | 2.12 | n/a | n/a |
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