rs706825 chr12:51926892 T>C

Sequence
tttgtaagttcaacttgacaaagg[T/C]agttgtcctaaagcgctgggcctg
ASB in cell types
K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.29 0.82 1.001.2·10-10 1.36 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP autism,  body mass index (bmi),  childhood acute lymphoblastic leukemia,  college completion,  fasting insulin,  hdl cholesterol,  homa-b,  homa-ir,  spine bone mineral density (bmd),  triglycerides change with statins
GTEx eQTL Nerve_Tibial

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