rs707845 chr6:16711624 A>G
- Sequence
ccatctatatctatatagatatag[A/G]ttgtttgttttgcgacacatcatt
- ASB in cell types
- GM12890 (Lymphoblastoid Cell Lines) GM17942 (lymphoblastoid cell) CFPAC-1(pancreatic ductal adenocarcinoma) GM19240 (B cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN JUN_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.43 | 0.75 | 1.44 | n/a | No Hit | |||
| JUN_HUMAN | -0.34 | 1.18 | 1.25 | n/a | No Hit | |||
| RAD21_HUMAN | 1.36 | 0.15 | 1.00 | n/a | n/a |
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