rs7088617 chr10:93489380 C>T
- Sequence
tacccccagctgctgggagagctg[C/T]cagaaaacctccctcagctgttag
- ASB in cell types
- RH18 (alveolar rhabdomyosarcoma)
- ASB for transcription factors
- MYF5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MYF5_HUMAN | 2.90 | n/a | 1.00 | -1.49 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Colon_Sigmoid, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Testis, Thyroid