rs709488 chr3:107982105 A>C

Sequence
cagcaaagaggaaggtgaaaaagg[A/C]aggaagaacgggaggaagggagcc
ASB in cell types
CD14+ monocytes macrophages form periferal blood
ASB for transcription factors
STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.14 -1.31 1.7·10-31.00 2.00 -1.29 Weak Concordant
Items per page:
1 – 1 of 1

Motif analysis

STAT1_HUMAN Weak Concordant
STAT1_HUMAN pic

Genetic associations

GRASP college completion,  hdl cholesterol,  refractive error,  total cholesterol,  years of education
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Testis

Download