rs711879 chr6:150905950 G>A

Sequence
tgagcaaagagagaccaagatggc[G/A]gttgaggtgtctgctcccacagtg
ASB in cell types
SK-N-SH (neuroblastoma) GM02630 (Fanconi anemi)
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.17 0.83 1.001.5·10-6 1.34 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP breast cancer

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