rs712616 chr5:116886130 C>G
- Sequence
tgaacacagcttactgcaccctac[C/G]tcatcctcctgagcttaagcaatc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF7_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF7_HUMAN | -3.18 | 3.42 | 1.00 | 2.63 | Concordant | |||
| STAG1_HUMAN | 1.52 | -0.12 | 1.00 | n/a | n/a |
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Motif analysis
