rs713989 chr22:25110812 C>T

Sequence
ggagctcacgtgacctagtgtaaa[C/T]catgaatcattcccattgctccca
ASB in cell types
HEK293 (embryonic kidney) transverse colon
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.85 0.77 0.840.04 1.26 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP alzheimers disease,  schizophrenia,  total cholesterol
GTEx eQTL Artery_Tibial,  Brain_Cortex,  Brain_Nucleus_accumbens_basal_ganglia,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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