rs714543 chr7:44847477 A>G
- Sequence
cgtgtggttctggtctataaaacc[A/G]ttctttgtcgctcaaaagaccaca
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) HeLa S3 (cervical adenocarcinoma) Th1-cells
- ASB for transcription factors
- HTF4_HUMAN PRDM4_HUMAN MYB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HTF4_HUMAN | n/a | 3.79 | 2.00 | n/a | No Hit | |||
| PRDM4_HUMAN | -2.10 | 2.46 | 1.00 | 1.01 | Weak Concordant | |||
| MYB_HUMAN | 0.04 | 2.26 | 2.00 | n/a | No Hit |
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Motif analysis
