rs715217 chr20:1491762 C>T
- Sequence
agccttttgtttcttcatctgcag[C/T]gtaggaacaacggcagttccctcc
- ASB in cell types
- CD14+ monocytes macrophages form periferal blood macrophages
- ASB for transcription factors
- STAT1_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.66 | n/a | 3.00 | n/a | No Hit | |||
| SPI1_HUMAN | 2.23 | n/a | 5.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, advanced age-related macular degeneration, body mass index (bmi), major depressive disorder, major depressive disorder (males), recurrent early onset major depressive disorder, sporadic creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Colon_Transverse, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Whole_Blood