rs716172 chr11:19919370 A>T
- Sequence
atatgaagagctctttgagcctta[A/T]ggaaacagagtagatgttgccaag
- ASB in cell types
- liver PC3(bone mets prostate adenocarcinoma)
- ASB for transcription factors
- HNF4A_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | -4.57 | 2.60 | 1.50 | n/a | No Hit | |||
| ANDR_HUMAN | 1.78 | 0.45 | 1.86 | -0.75 | Weak Concordant |
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Motif analysis
