rs716173 chr11:19919433 G>A
- Sequence
cactccagacagtgagaactgtgt[G/A]tttactgggctgcttccagtcagc
- ASB in cell types
- adipose LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN PPARG_HUMAN TF65_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.46 | -0.33 | 1.69 | -3.79 | Concordant | |||
| PPARG_HUMAN | 2.34 | -0.03 | 2.17 | n/a | No Hit | |||
| TF65_HUMAN | 1.95 | n/a | 2.50 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.32 | 0.04 | 1.62 | -0.99 | Weak Concordant | |||
| ESR1_HUMAN | 1.17 | 0.07 | 1.75 | n/a | No Hit |
Items per page:
1 – 5 of 5
Motif analysis
