rs716376 chr5:158120069 T>C

Sequence
ctgtgcctgttagtttcagtgagt[T/C]acagccagagtatttaacagcaga
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SMCA4_HUMAN SSXT_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN -1.51 1.87 1.000.03 1.25 n/a n/a
SSXT_HUMAN -1.53 1.75 1.000.05 1.17 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol schizophrenia triglycerides

Download