rs716387 chr9:71285335 T>C
- Sequence
ttctcactagcatccactagaggg[T/C]cgtagctgcactatgtaaagagat
- ASB in cell types
- MS-1 (Small cell lung carcinoma) HBMEC (human brain microvascular endothelial cells) VCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.53 | 0.82 | 1.23 | 3.68 | Concordant |
Items per page:
1 – 1 of 1
Motif analysis
