rs71647015 chr1:11908328 T>C
- Sequence
cgttaaatcgcgtgtggagctatg[T/C]aaagtgtattatagaacaaatgcg
- ASB in cell types
- primary B-CLL cells RCC 7860 (Renal cell carcinoma)
- ASB for transcription factors
- ETS1_HUMAN NDF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ETS1_HUMAN | n/a | 2.38 | 2.00 | n/a | No Hit | |||
| NDF1_HUMAN | 1.91 | -1.28 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Lung, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Stomach, Thyroid, Whole_Blood