rs717426 chr8:3748872 C>T
- Sequence
tatttgtgtcaacacaagctttat[C/T]gccactgtcagggtttcccttgat
- ASB in cell types
- LNCaP (prostate carcinoma) LN95(Prostate adenocarcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN HXB13_HUMAN A2NVP9_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.05 | 2.07 | 1.95 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.32 | 1.69 | 3.14 | n/a | No Hit | |||
| HXB13_HUMAN | 0.21 | 2.41 | 3.00 | 4.23 | Concordant | |||
| A2NVP9_HUMAN | 0.72 | 1.95 | 3.00 | n/a | n/a |
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Motif analysis
