rs717568 chr12:4579554 A>T
- Sequence
aatgaatcactccccctggagtta[A/T]gcaaggaggctgcatgtggactgg
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) bipolar neuron thyroid gland GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.77 | -0.18 | 1.32 | -1.37 | Weak Concordant |
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Motif analysis
