rs718050 chr20:50580393 A>G

Sequence
gttaacaaccattattgagtacct[A/G]ttgatatgtgtggtgtactgagtt
ASB in cell types
RWPE1 (prostate epithelial cells) GM12891 (male B- cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
RWPE1 (prostate epithelial cells) 1.41 -1.41 0.031.00 1.00
GM12891 (male B- cells lymphoblastoid cell line) -0.57 1.05 1.000.04 1.00
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Motif analysis

No data available

Genetic associations

GRASP college completion,  height,  ldl cholesterol,  premature ovarian failure,  sporadic creutzfeldt-jakob disease,  total cholesterol,  years of education
GTEx eQTL Brain_Caudate_basal_ganglia,  Brain_Hypothalamus,  Brain_Spinal_cord_cervical_c-1,  Nerve_Tibial,  Testis,  Whole_Blood

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