rs718439 chr11:17812660 G>A
- Sequence
ctgtgtttgccttcatctctccag[G/A]atgacttaattgtacctttgactg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) ZR-75-1 (invasive ductal carcinoma) MCF7 WS8 cells primary breast cancer
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.49 | 0.79 | 1.95 | n/a | No Hit | |||
| ESR1_HUMAN | 1.13 | 0.12 | 1.97 | n/a | No Hit |
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