rs718766 chr7:121385448 T>C
- Sequence
agccaccacaatgtcgctggacaa[T/C]gaaacactgcagctggaaagagcg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.17 | n/a | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP bone thickness, bone strength, osteoporotic fracture risk, diabetic retinopathy in type 2 diabetes mellitus, diastolic blood pressure (dbp), total body bone mineral density (bmd)
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg