rs719856 chr6:47626986 G>A

Sequence
tgacttgctttcaataactgttac[G/A]taatgcagttgatgttgtaaccta
ASB in cell types
MSC (mesenchymal stem cells)
ASB for transcription factors
CEBPB_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN 2.43 -0.23 1.3·10-51.00 1.00 -2.65 Concordant
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Motif analysis

CEBPB_HUMAN Concordant
CEBPB_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  forward wave amplitude,  height
GTEx eQTL Artery_Coronary,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

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