rs720041 chr2:230008407 A>G
- Sequence
ctgggctttggatctgagtagcca[A/G]aactatagaacctttcgttttgca
- ASB in cell types
- foreskin keratinocyte HeLa (cervical adenocarcinoma) GM12878 (female B-cells lymphoblastoid cell line) THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- CTCF_HUMAN TBX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.80 | 0.69 | 1.33 | n/a | No Hit | |||
| TBX21_HUMAN | 2.06 | -2.03 | 1.00 | n/a | No Hit |
Items per page:
1 – 2 of 2