rs721781 chr19:55492713 G>C

Sequence
gactccagagtcctccaatgatga[G/C]tcaactcttaccccaacagaaatg
ASB in cell types
keratinocytes
ASB for transcription factors
SNAI2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN 2.92 n/a 1.5·10-31.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP barnes akathisia rating scale,  birth weight,  rheumatoid arthritis,  serum creatinine,  triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Prostate,  Thyroid,  Whole_Blood

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