rs7221010 chr17:61574927 C>A
- Sequence
agttttcactcccaaaaatgaaaa[C/A]ttctggctgttttttaaagtgagt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7L-P(immortalized breast epithelial cell line)
- ASB for transcription factors
- P53_HUMAN ESR1_HUMAN Z512B_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| P53_HUMAN | -2.63 | 2.26 | 6.00 | n/a | No Hit | |||
| ESR1_HUMAN | n/a | 2.65 | 6.00 | n/a | No Hit | |||
| Z512B_HUMAN | n/a | 3.09 | 6.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.56 | 1.39 | 1.85 | n/a | No Hit | |||
| ZN574_HUMAN | n/a | 3.02 | 6.00 | n/a | No Hit |
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Motif analysis
