rs7222178 chr17:61574921 T>A
- Sequence
gaggcaagttttcactcccaaaaa[T/A]gaaaacttctggctgttttttaaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7L-P(immortalized breast epithelial cell line) MCF-7 C4-12 (invasive breast ductal carcinoma)
- ASB for transcription factors
- P53_HUMAN GATA3_HUMAN Z512B_HUMAN ZFX_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| P53_HUMAN | -2.34 | 2.23 | 6.00 | n/a | No Hit | |||
| GATA3_HUMAN | n/a | 2.94 | 6.00 | n/a | No Hit | |||
| Z512B_HUMAN | n/a | 3.25 | 6.00 | n/a | n/a | |||
| ZFX_HUMAN | 0.28 | 2.89 | 4.00 | n/a | No Hit | |||
| ZN574_HUMAN | n/a | 2.91 | 6.00 | n/a | No Hit |
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