rs723439 chr14:58640137 G>A
- Sequence
ccatctgtcacctttggaaaccca[G/A]aggcgttcaaatctcgatgggcct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- IKZF2_HUMAN ELF1_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -1.31 | 1.73 | 1.00 | n/a | n/a | |||
| ELF1_HUMAN | 2.67 | -2.54 | 1.00 | n/a | No Hit | |||
| STAG1_HUMAN | 1.32 | 0.13 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, body mass index (bmi), ldl cholesterol, serum creatinine, total cholesterol