rs723642 chr6:127460675 T>C

Sequence
ctgataaaacccaagcaaggctca[T/C]tgtggtaaagcatcatgcaaaagt
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
ETS1_HUMAN SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ETS1_HUMAN 2.18 n/a 3.4·10-31.00 3.00 n/a No Hit
SMCA4_HUMAN 1.69 0.35 0.020.68 3.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP arthritis including non-rheumatoid,  hdl cholesterol,  systolic blood pressure (sbp),  triglycerides change with statins,  type 1 diabetes, combined control dataset,  variant creutzfeldt-jakob disease,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Testis,  Thyroid

Download