rs723928 chr20:50433830 C>T
- Sequence
aatttaaccgccaccaccccgccg[C/T]caccactagtctgacaacagccaa
- ASB in cell types
- K562 (myelogenous leukemia) HCT-116-RAD21-mAC
- ASB for transcription factors
- CTCF_HUMAN NFIC_HUMAN IKZF1_HUMAN LMBL2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.34 | 2.14 | 1.73 | n/a | No Hit | |||
| NFIC_HUMAN | n/a | 2.23 | 2.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -1.14 | 3.21 | 2.00 | n/a | n/a | |||
| LMBL2_HUMAN | n/a | 3.81 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | -1.14 | 2.69 | 2.00 | n/a | n/a |
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