rs7269 chr16:70162281 A>G
- Sequence
gtgactcatcgtttgtgtttgtca[A/G]tttgcagttcagcttagcccttcc
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293 (embryonic kidney) LHSAR (prostate epithelial cells) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ZN652_HUMAN ANDR_HUMAN FOXA1_HUMAN ZN189_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN652_HUMAN | 2.92 | n/a | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 1.82 | 0.05 | 1.67 | 2.06 | Discordant | |||
| FOXA1_HUMAN | 2.61 | 0.19 | 2.50 | n/a | No Hit | |||
| ZN189_HUMAN | 2.65 | -2.34 | 1.00 | n/a | No Hit | |||
| ELF1_HUMAN | 2.54 | -2.58 | 1.00 | n/a | No Hit |
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Motif analysis
