rs726966 chr6:15893796 C>T
- Sequence
agggagataaggaataatagtcat[C/T]ggaagctcctgagcctacaagctc
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells lymphoblastoid cell line) GM19239 (male B-cells lymphoblastoid cell line)
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| foreskin keratinocyte | n/a | 1.20 | 2.67 | |||
| GM12878 (female B-cells lymphoblastoid cell line) | 0.76 | 0.96 | 1.07 | |||
| GM19239 (male B-cells lymphoblastoid cell line) | 0.00 | 0.72 | 1.00 |
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