rs72712790 chr8:126110842 G>A

Sequence
tgggaccgagccctcaccctgtgg[G/A]atctgacactgtctgcaggtggat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN MEF2B_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.28 -2.07 1.1·10-31.00 1.00 n/a n/a
MEF2B_HUMAN 2.49 -2.03 9.6·10-31.00 1.00 n/a No Hit
IKZF1_HUMAN 2.00 -0.87 0.011.00 1.00 n/a n/a
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

Download