rs72714915 chr1:161166553 C>G
- Sequence
ggcgtactgcccgccgcccgagcc[C/G]tgcgagggccgatagcgagggtgt
- ASB in cell types
- HEK293 (embryonic kidney) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ZFHX2_HUMAN ZN335_HUMAN EGR2_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFHX2_HUMAN | 1.78 | n/a | 2.00 | n/a | n/a | |||
| ZN335_HUMAN | 1.18 | n/a | 2.00 | n/a | No Hit | |||
| EGR2_HUMAN | 2.84 | n/a | 2.00 | 0.55 | Weak Discordant | |||
| ANDR_HUMAN | 2.52 | -1.55 | 2.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood