rs72716454 chr14:65782049 C>T
- Sequence
ctcagttgcctgaaaaacagtgac[C/T]catactgtgagctgacattttctg
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.98 | 1.26 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | -0.04 | 1.70 | 1.00 | -2.29 | Discordant |
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Motif analysis
