rs72720022 chr15:44727061 T>C
- Sequence
attcctatatcataaatttactta[T/C]ttattcacttagtcatttgttaaa
- ASB in cell types
- CFPAC-1(pancreatic ductal adenocarcinoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- FOXA2_HUMAN FOXA1_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 2.15 | -0.83 | 1.06 | -0.90 | Weak Concordant | |||
| FOXA1_HUMAN | 1.72 | 0.16 | 1.14 | -1.13 | Weak Concordant | |||
| IKZF1_HUMAN | -1.19 | 1.33 | 1.25 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
