rs72729355 chr15:38673199 G>C

Sequence
ggtggaaggagagcctcatgagat[G/C]tttcttgaccgggagagccgcctt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ATF7_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF7_HUMAN -2.00 2.38 1.000.02 1.00 n/a No Hit
IKZF2_HUMAN -0.98 1.28 1.000.03 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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