rs72732966 chr15:51982286 G>A
- Sequence
agatactatctcgtcggcgggtgg[G/A]gactgctggcacgcaggctgcatc
- ASB in cell types
- ER+ breast tumor THP-1 (acute monocytic leukemia) HeLa (cervical adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.25 | 1.32 | 1.20 | n/a | No Hit | |||
| ESR1_HUMAN | n/a | 3.10 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis