rs72737337 chr15:72783368 G>A

Sequence
gcgcggacagcagcgcctcccggg[G/A]acctctgagaagccctgtttctgc
ASB in cell types
foreskin keratinocyte monocytes from periferal blood
ASB for transcription factors
CTCF_HUMAN SRBP2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.10 0.63 0.010.93 1.20 -2.37 Concordant
SRBP2_HUMAN 2.21 -1.47 0.041.00 2.00 n/a No Hit
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Motif analysis

CTCF_HUMAN Concordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Testis

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