rs72744566 chr1:218984047 G>A
- Sequence
cacacctcccctgctgcagctggt[G/A]tccccctagtggcttcttctgatg
- ASB in cell types
- GM10847 (female B-cells Lymphoblastoid Cell Lines) GM12890 (Lymphoblastoid Cell Lines) SYO-1(Biphasic synovial sarcoma) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.66 | -0.91 | 1.56 | -0.46 | Weak Concordant |
Items per page:
1 – 1 of 1
Motif analysis
