rs72748376 chr9:92147407 C>T
- Sequence
ccttggtgtgccgtggctaagcca[C/T]actccacccctgacctgcggggga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- TF65_HUMAN BHE40_HUMAN FOXK2_HUMAN REQU_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 3.15 | n/a | 2.00 | n/a | No Hit | |||
| BHE40_HUMAN | 2.07 | -1.76 | 1.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.50 | n/a | 1.50 | n/a | No Hit | |||
| REQU_HUMAN | 2.35 | -1.88 | 1.00 | n/a | n/a | |||
| NR2C1_HUMAN | 2.28 | -1.98 | 1.00 | -0.75 | Weak Concordant |
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Motif analysis
