rs72750080 chr1:233241444 C>T
- Sequence
tgaaagtacaatctctttctaata[C/T]gtctaagaaaacaagataagaatg
- ASB in cell types
- MS-1 (Small cell lung carcinoma) GM10847 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.48 | 1.06 | 1.15 | n/a | No Hit | |||
| STAG1_HUMAN | 0.27 | 1.28 | 1.27 | n/a | n/a |
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