rs727517 chr10:13220155 T>A
- Sequence
gagtcaagttattggttgacatcc[T/A]cctgatcaccaccatgcagcaaag
- ASB in cell types
- K562 (myelogenous leukemia) GM19239 (male B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma) GM18951 (B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.97 | 1.42 | 1.46 | n/a | No Hit | |||
| SPI1_HUMAN | 1.29 | -1.09 | 1.50 | n/a | No Hit |
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