rs72755251 chr1:241811251 A>G
- Sequence
ataaccattgcattacggttgaag[A/G]aacgggaaatgaaattatttgtgt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MV-4-11 (Childhood acute monocytic leukemia) MDM(monocyte derived macrophages) macrophages form periferal blood
- ASB for transcription factors
- SPI1_HUMAN ATF7_HUMAN ARNT_HUMAN CDK9_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.82 | -4.96 | 1.67 | -1.23 | Weak Concordant | |||
| ATF7_HUMAN | 3.38 | n/a | 1.50 | n/a | No Hit | |||
| ARNT_HUMAN | 3.12 | -3.00 | 1.00 | n/a | No Hit | |||
| CDK9_HUMAN | 2.34 | 0.01 | 1.00 | n/a | n/a | |||
| BRD4_HUMAN | 2.00 | 0.18 | 1.00 | n/a | n/a |
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Motif analysis
