rs72761912 chr9:117936317 G>C
- Sequence
attgtgatagttcccaagttcaca[G/C]gatgtgaaaaacagggcagataag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- MTA2_HUMAN HTF4_HUMAN TBX21_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | 3.39 | -3.08 | 1.00 | n/a | n/a | |||
| HTF4_HUMAN | 3.25 | -3.24 | 1.00 | n/a | No Hit | |||
| TBX21_HUMAN | 3.01 | -2.88 | 1.00 | 2.61 | Discordant | |||
| IKZF2_HUMAN | 2.21 | 0.01 | 1.00 | n/a | n/a |
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Motif analysis
