rs72762190 chr9:121529738 G>A
- Sequence
ggctggcggtggaggccacttttc[G/A]tgggaactcaggcaaggaggaagt
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) HUVEC-C (HUVEC, umbilical vein endothelial cells) HCC-1599(ductal breast carcinoma)
- ASB for transcription factors
- TCF21_HUMAN TF65_HUMAN SUH_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 2.54 | -0.60 | 2.25 | n/a | No Hit | |||
| TF65_HUMAN | 2.24 | n/a | 3.00 | n/a | No Hit | |||
| SUH_HUMAN | 0.92 | n/a | 3.00 | -3.31 | Concordant |
Items per page:
1 – 3 of 3
Motif analysis
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Whole_Blood